PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG021750.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 901aa MW: 99290.5 Da PI: 8.496

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG021750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.4	5.3e-07	366	385	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCpp.Cp 19 CG+HkC + CH+GpC++ C+ TRIDC3BG021750.1 366 CGRHKCPERCHRGPCDVtCR 385 ****************97 PP
2	zf-NF-X1	17.2	1.1e-05	419	436	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C++ C+ G+CppC TRIDC3BG021750.1 419 CGRHACKRRCCVGDCPPC 436 ****************** PP
3	zf-NF-X1	20.7	8.7e-07	446	465	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+HkC ++CH+G C pCp+ TRIDC3BG021750.1 446 CGNHKCLSPCHRGACSPCPL 465 ******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 901 aa Download sequence
MPSSYAAAAA AASSSRKPAP FTTATATTRK PAPLPAPAPP PSNPSHVSDS DPSSYSSSGE 60 ETDLSACDPA TASVLSTYLS VAGNGADLSK VGIFLNSAAR RRSPPCLICL DPIRPSDPVW 120 SCSASCFALL HLPCIQSWAH QSASAAPSPT WGCPKCRVAY PKSQTPTSYH CFCSKTEDPP 180 ADPWILPHSC GDVCGRRLNS NPDSGCEHTC LLLCHPGPCP PCPAVVPNAQ CFCGAHREPR 240 RCAHQRYSCK GKCNKRLSCE LHRCPVDCHD GPCPPCAVRG NHKCECGETM VERLCSERVF 300 QCKRECSGML ECGKHRCERG CHGGKCGECP LRGQRTCPCG KKDYPRLECD VEAATCGSTC 360 EKVLGCGRHK CPERCHRGPC DVTCRLVIKK SCRCGGLKKE LPCHQDLTCE RKCQRLRACG 420 RHACKRRCCV GDCPPCAETC DRRLRCGNHK CLSPCHRGAC SPCPLMKTIS CFCGKTYFEV 480 PCGTEKNQKP PKCSKRCNID RLCRHKLECR PHKCHYGACP PCKLICGEQL SCGHKCKERC 540 HGSIPPPNPE FTVKPMKKKM EKHIECTPGT PCPPCQVVVL VPCFGEHLGQ ERAIPCSKSR 600 QFPCQNLCGN LLHCGNHYCT KDCHVLEIPS DQRKADTILS LSRKNTLAEP CERCNLPCQR 660 ARDPPCSHPC PLRCHLSDCL PCKALVKRSC HCGAMTHAFE CMYYNNLNAK QQLKVRSCGG 720 PCHRKLPNCP HLCSEICHPG QCPSVDQCMK KVNVRCACNT LKKEWVCQDV LKEYRRSGRD 780 PKEVAKGQFG VGLIACGGDC VKKVNVPAAE LHQRKVQENK NPAAEVANVP KRRKKRDRGA 840 QEPVQVSMWQ RIKWYLVVIT ALAGLVVLGL VIWKGVYQIS DWMNEMEEQK ARERLLRAER 900 L

Sequence ? help Back to Top

Protein Sequence Length: 901 aa Download sequence

MPSSYAAAAA AASSSRKPAP FTTATATTRK PAPLPAPAPP PSNPSHVSDS DPSSYSSSGE  60
ETDLSACDPA TASVLSTYLS VAGNGADLSK VGIFLNSAAR RRSPPCLICL DPIRPSDPVW  120
SCSASCFALL HLPCIQSWAH QSASAAPSPT WGCPKCRVAY PKSQTPTSYH CFCSKTEDPP  180
ADPWILPHSC GDVCGRRLNS NPDSGCEHTC LLLCHPGPCP PCPAVVPNAQ CFCGAHREPR  240
RCAHQRYSCK GKCNKRLSCE LHRCPVDCHD GPCPPCAVRG NHKCECGETM VERLCSERVF  300
QCKRECSGML ECGKHRCERG CHGGKCGECP LRGQRTCPCG KKDYPRLECD VEAATCGSTC  360
EKVLGCGRHK CPERCHRGPC DVTCRLVIKK SCRCGGLKKE LPCHQDLTCE RKCQRLRACG  420
RHACKRRCCV GDCPPCAETC DRRLRCGNHK CLSPCHRGAC SPCPLMKTIS CFCGKTYFEV  480
PCGTEKNQKP PKCSKRCNID RLCRHKLECR PHKCHYGACP PCKLICGEQL SCGHKCKERC  540
HGSIPPPNPE FTVKPMKKKM EKHIECTPGT PCPPCQVVVL VPCFGEHLGQ ERAIPCSKSR  600
QFPCQNLCGN LLHCGNHYCT KDCHVLEIPS DQRKADTILS LSRKNTLAEP CERCNLPCQR  660
ARDPPCSHPC PLRCHLSDCL PCKALVKRSC HCGAMTHAFE CMYYNNLNAK QQLKVRSCGG  720
PCHRKLPNCP HLCSEICHPG QCPSVDQCMK KVNVRCACNT LKKEWVCQDV LKEYRRSGRD  780
PKEVAKGQFG VGLIACGGDC VKKVNVPAAE LHQRKVQENK NPAAEVANVP KRRKKRDRGA  840
QEPVQVSMWQ RIKWYLVVIT ALAGLVVLGL VIWKGVYQIS DWMNEMEEQK ARERLLRAER  900
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG021750.1