PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG021750.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-X1
Protein Properties Length: 424aa    MW: 45561.4 Da    PI: 8.2787
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG021750.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X122.62.2e-07366385119
          zf-NF-X1   1 CGkHkCqklCHeGpCpp.Cp 19 
                       CG+HkC + CH+GpC++ C+
  TRIDC3BG021750.3 366 CGRHKCPERCHRGPCDVtCR 385
                       *****************9*7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MPSSYAAAAA AASSSRKPAP FTTATATTRK PAPLPAPAPP PSNPSHVSDS DPSSYSSSGE  60
ETDLSACDPA TASVLSTYLS VAGNGADLSK VGIFLNSAAR RRSPPCLICL DPIRPSDPVW  120
SCSASCFALL HLPCIQSWAH QSASAAPSPT WGCPKCRVAY PKSQTPTSYH CFCSKTEDPP  180
ADPWILPHSC GDVCGRRLNS NPDSGCEHTC LLLCHPGPCP PCPAVVPNAQ CFCGAHREPR  240
RCAHQRYSCK GKCNKRLSCE LHRCPVDCHD GPCPPCAVRG NHKCECGETM VERLCSERVF  300
QCKRECSGML ECGKHRCERG CHGGKCGECP LRGQRTCPCG KKDYPRLECD VEAATCGSTC  360
EKVLGCGRHK CPERCHRGPC DVTCRLVIKK SCRCGGLKKE AALPPRLDLR KKMSAFTCLW  420
TPRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.11e-100NF-X1 family protein