PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG022400.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 183aa    MW: 19718.2 Da    PI: 7.6086
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG022400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-171463255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr +k +grWv+eIr p++   r r++lg++ +ae+Aa+a +aa+ +l+g
  TRIDC3BG022400.1 14 RYKGVRLRK-WGRWVSEIRMPNS---RERIWLGSYQSAEKAARAFDAAAVCLRG 63
                      7******99.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
SAEPHPSPPP PERRYKGVRL RKWGRWVSEI RMPNSRERIW LGSYQSAEKA ARAFDAAAVC  60
LRGSRAGSLN FPEFPPDVQH IPGIVPTPER IQAAATRHAN RAYPIPAGRT TTVTTAMPSQ  120
EVTSTSNDIA VESSPSAGSA AAYDDGLDWS FMDALPSMPA SSAPGTNVPV MDDVMFGFSP  180
MPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-26ERF family protein