PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG023070.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 266aa MW: 27744.3 Da PI: 9.9335

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG023070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.3	2.8e-13	76	122	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+ErrRR+riN +++Lr+++P K++Ka+ L ++++++k+L TRIDC3BG023070.1 76 RSHSEAERRRRERINAHLATLRSMVPCT-----DKMDKAALLAEVINHVKKL 122 68***********************7.....6**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MNSGPFSGAV GLYDGFYGGF GGGHGHEHGF GQHLGASTSS SVLLDGGTGE LAAAAAADVP 60 KRKGGAREEK AATALRSHSE AERRRRERIN AHLATLRSMV PCTDKMDKAA LLAEVINHVK 120 KLKSEAARVG KHCPVPSGAD EVTVEVVQQA QASPQHSRAG AAFLVKATLS CGDGCADLFA 180 DVRRALQPLA PRVVGSEVTT LGGRVRITVA MLREGAVTAA SVRQALDSVL DRVASAAAAF 240 EFSPRDSLLA SKRRRVWTFD SSSSSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	87	ERRRRE
2	83	123	RRRRERINAHLATLRSMVPCTDKMDKAALLAEVINHVKKLK
3	252	256	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-23	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG023070.1