PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG023500.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 565aa MW: 59200.6 Da PI: 6.9261

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG023500.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.9	9.3e-35	198	294	2	83
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l + ++++s+++++s TRIDC3BG023500.3 198 TGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKLDTLpawqptavapaasnaAAPPSSSTQPDSAD 290 79**************************************************************66665555444433322222222222222 PP TCP 80 ssas 83 +s++ TRIDC3BG023500.3 291 NSDD 294 2222 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
LLFPPSYGIR RAGWTRIGAA VAEAKLQPGD LDPRHHHRGP HGGDGAGGGG GGGGGGQREA 60 ADEEQQHHHY RLLQLHQEVQ QDQEPPPAPV FQLSHLQAAS VRQPGSSAEY ALLAPMGDAG 120 QSHHHHGLQT QLLSFGGAGS HHHHMHQFTA QAQPPAASQT RARGGRGGEM VPATPARVRG 180 GGGGEIVAVQ GGHIVRSTGR KDRHSKVCTA RGPRDRRVRL SAHTAIQFYD VQDRLGYDRP 240 SKAVDWLIKN AKDAIDKLDT LPAWQPTAVA PAASNAAAPP SSSTQPDSAD NSDDQAQAIT 300 IAHSSFDFAG SGGAGGATGG ISFLPPSLDS DSIADTIKSF FPMGGTTGGE PSSSTVAAHS 360 SAMGFQGYTP DLLSRTGSQS QELRLSLQPL PDPMFHHHQQ QEQHRSDGHD GNGTAQQTLF 420 PGAASYSFGG GGAMWGEQAA SQRMMPWNVP DPGGGSTGGY LFNVSQQAAH MQAALSGQSQ 480 FFFQRGPLQS SNQPSDRGWP ETVEADDNNP MQQHQGGLNP SVSAIGFGPG VSFSGFRVPA 540 RMQGNEEHNG GNGDKPPSVS SASHH

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

LLFPPSYGIR RAGWTRIGAA VAEAKLQPGD LDPRHHHRGP HGGDGAGGGG GGGGGGQREA  60
ADEEQQHHHY RLLQLHQEVQ QDQEPPPAPV FQLSHLQAAS VRQPGSSAEY ALLAPMGDAG  120
QSHHHHGLQT QLLSFGGAGS HHHHMHQFTA QAQPPAASQT RARGGRGGEM VPATPARVRG  180
GGGGEIVAVQ GGHIVRSTGR KDRHSKVCTA RGPRDRRVRL SAHTAIQFYD VQDRLGYDRP  240
SKAVDWLIKN AKDAIDKLDT LPAWQPTAVA PAASNAAAPP SSSTQPDSAD NSDDQAQAIT  300
IAHSSFDFAG SGGAGGATGG ISFLPPSLDS DSIADTIKSF FPMGGTTGGE PSSSTVAAHS  360
SAMGFQGYTP DLLSRTGSQS QELRLSLQPL PDPMFHHHQQ QEQHRSDGHD GNGTAQQTLF  420
PGAASYSFGG GGAMWGEQAA SQRMMPWNVP DPGGGSTGGY LFNVSQQAAH MQAALSGQSQ  480
FFFQRGPLQS SNQPSDRGWP ETVEADDNNP MQQHQGGLNP SVSAIGFGPG VSFSGFRVPA  540
RMQGNEEHNG GNGDKPPSVS SASHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	3e-37	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG023500.3