PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG024070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 187aa    MW: 21468.4 Da    PI: 8.7147
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG024070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1453.5e-1427106190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF +r  ks+ + + +   +++ vC ++gk+++ ++          + r++C a++++ +++d+ w++++ +  HnH l+
  TRIDC3BG024070.1  27 DFYNLYSWEIGFGIRYGKSRLNVERT-KCMQEIVCGCSGKPKRGNT---------RTCRCECPAMIRLLRSNDNGWYISEHRPSHNHVLT 106
                       6*****************99995544.67899*******9988654.........589*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
GYAEKRTDTV VVPAVGYTFD SLGEAYDFYN LYSWEIGFGI RYGKSRLNVE RTKCMQEIVC  60
GCSGKPKRGN TRTCRCECPA MIRLLRSNDN GWYISEHRPS HNHVLTDKCG EKVYWPSHKH  120
IDMYTRDIVK QLRENNISIG KVYNIIGSFF GSMNNVPFTK RALRGLCGEI SRDQADDDVR  180
KTMDVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-12FAR1 family protein