PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG025950.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 526aa MW: 56945.5 Da PI: 6.0501

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG025950.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.9	1.2e-24	231	286	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk.gLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm+ + Lt+++++SHLQkYR++ TRIDC3BG025950.3 231 KVKVDWTPELHRRFVQAVEQL-GLDKAVPSRILELMGNEyRLTRHNIASHLQKYRSH 286 5689***************.**********88747************86 PP
2	Myb_DNA-binding	41.6	2.8e-13	234	284	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg..kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg ++t+ ++ s++qky+ TRIDC3BG025950.3 234 VDWTPELHRRFVQAVEQLGLDkaVPSRILELMGneYRLTRHNIASHLQKYR 284 57*******************************99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
WCKDYFQVNS FPSLPILRAT YAEIGMLEVA TLQSPNPAVF SLGEHHHVDV GFPEATVEED 60 DFLLDYIDFS TCDMPFFHVD DGDDILPDLE VDPTELLAEF ADEPATTTVL SPAAEPAPEG 120 CETHHGGEAK TAAETELPAE MGMELPEGKG ETKGLLSSEE KDVRQHNDNN KNNNNVGDEV 180 CSAVTTDDSS AVVGSENSKS SASASAEGHS KMTSKPASAA AATKSSHGRR KVKVDWTPEL 240 HRRFVQAVEQ LGLDKAVPSR ILELMGNEYR LTRHNIASHL QKYRSHRKHL MAREAGAASW 300 TQKRQMYAAA GGPRKEAAAG GGPWVVPTVE FPPPGTMAHA GMAHHPGQPP PFCRPLHVWG 360 HPTGVDAPLP LSPPSMLPVW PRHLAPPPAW AHQPPMDPVY WHQQYNAARK WGPQAVTQCV 420 PPTMPPAPMM QRFAAPPMPG MMPHPMYRPI PPVPQSNKVA GLQLQLDAHP SKESIDAAIG 480 DVLVKPWLPL PLGLKPPSLD SVMSELHKQG IPKVPPAATT NCDGAA

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

WCKDYFQVNS FPSLPILRAT YAEIGMLEVA TLQSPNPAVF SLGEHHHVDV GFPEATVEED  60
DFLLDYIDFS TCDMPFFHVD DGDDILPDLE VDPTELLAEF ADEPATTTVL SPAAEPAPEG  120
CETHHGGEAK TAAETELPAE MGMELPEGKG ETKGLLSSEE KDVRQHNDNN KNNNNVGDEV  180
CSAVTTDDSS AVVGSENSKS SASASAEGHS KMTSKPASAA AATKSSHGRR KVKVDWTPEL  240
HRRFVQAVEQ LGLDKAVPSR ILELMGNEYR LTRHNIASHL QKYRSHRKHL MAREAGAASW  300
TQKRQMYAAA GGPRKEAAAG GGPWVVPTVE FPPPGTMAHA GMAHHPGQPP PFCRPLHVWG  360
HPTGVDAPLP LSPPSMLPVW PRHLAPPPAW AHQPPMDPVY WHQQYNAARK WGPQAVTQCV  420
PPTMPPAPMM QRFAAPPMPG MMPHPMYRPI PPVPQSNKVA GLQLQLDAHP SKESIDAAIG  480
DVLVKPWLPL PLGLKPPSLD SVMSELHKQG IPKVPPAATT NCDGAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	2e-56	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG025950.3