PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG026110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 348aa    MW: 37817.6 Da    PI: 6.3975
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG026110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK53.64.3e-1722492552
            RWP-RK 25 LgvclTvLKriCRqyGIkRWPhRkiksl 52
                      L vc+T++KriCRq+GI+RWP+Rki+++
  TRIDC3BG026110.1 22 LTVCPTTMKRICRQHGISRWPSRKINKV 49
                      77************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MVITLSGFDC WILALANYIF GLTVCPTTMK RICRQHGISR WPSRKINKVN RSLSKLKQVI  60
ESVQGSDAAF NLTSITGPLP TIPVGPSSDS FNKEKASESK AEHSNRAVDG DRDSSLQKSQ  120
ENGSHFGALM SQQGFADTGN NVQLEADKAS LSRSSSGEGS INSRTSEGSC QGSPTNQTFV  180
CQPIASMFLE PQEPQLNPEG FTKEPFQEPE LPLSRMLIED SGSSKDLKNL FGSAIGQPML  240
APPSNFGPMR NSGTVTIKAS FKEDIVRFRF QCSSSVMALK DEVAKRLRMD AGMFDIKYLD  300
DDHEWVKLAC NADLEECIEI SRHSGTHVIR LLVSDVAAHI GSSCGSSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43500.12e-45Nin-like family protein