PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026110.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 870aa MW: 95722 Da PI: 6.4153

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026110.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.7e-29	520	571	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3BG026110.4 520 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 571 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
GNSDTPIKKT ERLNNKWQFN LALHDDSTNS SCLFKEKLTH ALRYFKESTD QHLLVQVWAP 60 VKSGDRYVLT TSGQPFVLDH QSIGLLQYRA VSMMYMFSVD GDNAGELGLP GRVYKQKVPE 120 WTPNVQYYSS TEYPRLNHAI SYNVHGTVAL PVFDPSVQSC IAVVELIMTS KKINYADEVD 180 KVCKALEAVN LKSTEILEHP NVQVSIQSTR TINFAVFTMG GDLCVSVLCT QICNEGRQSA 240 LVEILEILTV VCEEHKLPLA QTWVPCKYRS VLAHGGGVKK SCLSFDGSCM GEVCMSTSDV 300 AFHVIDAHMW GFRDACVEHH LQKGQGVSGK AFIYQRPCFS KDISQFCKLE YPLVHYARMF 360 GLAGCFAICL QSPYTGDDYY MLEFFLPPSC KEEDDQNALL ESILGLINQC LRNLKVAGNG 420 ESNEASLQLS NVIMIESEDF KTNVHFENSE GFRESPEGET HGGAHEFDKV NSKVSEGHLL 480 ADDNSHNNGV SVSRPNGSAA SDSSLLHKNG KPPERRRGKA EKTISLEVLQ QYFSGSLKNA 540 AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLKQ VIESVQGSDA AFNLTSITGP 600 LPTIPVGPSS DSFNKEKASE SKAEHSNRAV DGDRDSSLQK SQENGSHFGA LMSQQGFADT 660 GNNVQLEADK ASLSRSSSGE GSINSRTSEG SCQGSPTNQT FVCQPIASMF LEPQEPQLNP 720 EGFTKEPFQE PELPLSRMLI EDSGSSKDLK NLFGSAIGQP MLAPPSNFGP MRNSGTVTIK 780 ASFKEDIVRF RFQCSSSVMA LKDEVAKRLR MDAGMFDIKY LDDDHEWVKL ACNADLEECI 840 EISRHSGTHV IRLLVSDVAA HIGSSCGSSG

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

GNSDTPIKKT ERLNNKWQFN LALHDDSTNS SCLFKEKLTH ALRYFKESTD QHLLVQVWAP  60
VKSGDRYVLT TSGQPFVLDH QSIGLLQYRA VSMMYMFSVD GDNAGELGLP GRVYKQKVPE  120
WTPNVQYYSS TEYPRLNHAI SYNVHGTVAL PVFDPSVQSC IAVVELIMTS KKINYADEVD  180
KVCKALEAVN LKSTEILEHP NVQVSIQSTR TINFAVFTMG GDLCVSVLCT QICNEGRQSA  240
LVEILEILTV VCEEHKLPLA QTWVPCKYRS VLAHGGGVKK SCLSFDGSCM GEVCMSTSDV  300
AFHVIDAHMW GFRDACVEHH LQKGQGVSGK AFIYQRPCFS KDISQFCKLE YPLVHYARMF  360
GLAGCFAICL QSPYTGDDYY MLEFFLPPSC KEEDDQNALL ESILGLINQC LRNLKVAGNG  420
ESNEASLQLS NVIMIESEDF KTNVHFENSE GFRESPEGET HGGAHEFDKV NSKVSEGHLL  480
ADDNSHNNGV SVSRPNGSAA SDSSLLHKNG KPPERRRGKA EKTISLEVLQ QYFSGSLKNA  540
AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLKQ VIESVQGSDA AFNLTSITGP  600
LPTIPVGPSS DSFNKEKASE SKAEHSNRAV DGDRDSSLQK SQENGSHFGA LMSQQGFADT  660
GNNVQLEADK ASLSRSSSGE GSINSRTSEG SCQGSPTNQT FVCQPIASMF LEPQEPQLNP  720
EGFTKEPFQE PELPLSRMLI EDSGSSKDLK NLFGSAIGQP MLAPPSNFGP MRNSGTVTIK  780
ASFKEDIVRF RFQCSSSVMA LKDEVAKRLR MDAGMFDIKY LDDDHEWVKL ACNADLEECI  840
EISRHSGTHV IRLLVSDVAA HIGSSCGSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026110.4