PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026720.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 225aa MW: 23383.2 Da PI: 9.891

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	101.9	5.9e-32	20	119	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlka 92 aCa+Ck++rrkC+++C la yfpa+++++f+++h +FG++n++kl+ka +e r++a+++l++eA++r rdP +G+++ ++ l+++ + l+a TRIDC3BG026720.1 20 ACAVCKHQRRKCEPNCELAAYFPANRMNDFRALHLVFGVANLTKLIKANATEAaRRRAAETLTWEARWRERDPSEGCYREVSCLRRENAVLRA 112 7********************************************9977766************************************* PP DUF260 93 elallke 99 e a+l++ TRIDC3BG026720.1 113 ENAALRR 119 9998775 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MTGGVNGNGG GGGGGGGGGA CAVCKHQRRK CEPNCELAAY FPANRMNDFR ALHLVFGVAN 60 LTKLIKANAT EAARRRAAET LTWEARWRER DPSEGCYREV SCLRRENAVL RAENAALRRR 120 ADQCACCATT LHQQQQQQQI LLVSAYNNGA RPPGGVLHGA STGVVPGGFY SGNAGAVRAA 180 NGNGPMPARP HVSAPAPQTT MAGYAQGDRH HAASGGANGA GAPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	1e-15	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026720.1