PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG027100.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 279aa    MW: 30031.8 Da    PI: 7.9445
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG027100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK73.62.6e-233784451
            RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51
                      ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rki s
  TRIDC3BG027100.2 37 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVS 84
                      6899*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MAASAQELPP AEQAPSLALA LVPQPQAQAQ IKPTRVSLSY EEISKLFSLP IAEAASILGV  60
CTSVLKRICR THGIVRWPYR KIVSGKGDDA KNAEREKAMQ LLELSKIAKQ KAISSSGSLA  120
TPVTSSGKTS NAPSLSQFSQ AKDIPTYMDD FKYGFPSSGL STETMKWWGT DSHTETAPAK  180
DDNREGSEST NEASKGMTDD ELDWGADEPE ADADGVAAAT DPSAQLCSLR RKAAGDGRRL  240
LNGDTGRVQQ LCRLNKRQKI VLAQVFGASL PEHWRSKLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.12e-10Nin-like family protein