PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG027100.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 155aa    MW: 16630.4 Da    PI: 10.6785
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG027100.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK759.1e-2471118451
            RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                       ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rki s
  TRIDC3BG027100.5  71 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVS 118
                       6899*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
PGRRRSHLLL TASIPFTLHT PLPPASNLFM SAPPMAASAQ ELPPAEQAPS LALALVPQPQ  60
AQAQIKPTRV SLSYEEISKL FSLPIAEAAS ILGVCTSVLK RICRTHGIVR WPYRKIVSGK  120
GDDAKNAERE KAMQLLELSK IAKQKAISSS GSLAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.14e-11Nin-like family protein