PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG027580.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 149aa    MW: 17035.6 Da    PI: 9.3509
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG027580.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.82.6e-1660139190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                        +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         ++r+gC+a++++ +++d+ w++++ +  HnH+l+
  TRIDC3BG027580.10  60 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 139
                        6*****************9999554.478899*******99886555.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MLSRVIGRVR IGKAPEEREM NPNRKSTLEL SLRAYADKKD GPVLCPSIGT SFDSIDEAYE  60
FYNLYSWECG FGVRLAKSRL NVERKRCMQE IVCACAGKPI RENSRSSRCG CNAMIRLLRS  120
NDKGWYIAEH KDAHNHPLSL TCGQKLHWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.13e-13FAR1 family protein