PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG031020.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 885aa MW: 97490.2 Da PI: 5.2159

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG031020.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.7e-19	56	102	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3BG031020.4 56 KGNWTPEEDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 102 79****************************.**********986 PP
2	Myb_DNA-binding	61.3	1.9e-19	108	154	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3BG031020.4 108 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 154 79****************************.***********97 PP
3	Myb_DNA-binding	49.2	1.2e-15	160	202	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3BG031020.4 160 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 202 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 885 aa Download sequence
IQSSPVMTSD KGKASKKAGE ASGQPSTTHE GKVSNEPQRQ RSLNGRTTGP TRRSTKGNWT 60 PEEDDILSRA VQTYNGKNWK KIAECFPDRT DVQCLHRWQK VLNPELIKGP WSKEEDDIIV 120 EMVKKYGPKK WSTIAQALPG RIGKQCRERW HNHLNPGINK DAWTQEEEIT LIHAHRMYGN 180 KWAELTKFLP GRTDNSIKNH WNSSVKKKID SYMSSGLLAQ VSRLPLIEHH AHFNSSPAIT 240 QQNSEDSDSN AVREVEDSSG CSQSSLAMVS CSQVQDTNLA LSCDLHVNAD TSKTEARDSQ 300 SSMCQEDYTS TEGAASALSE VHCHASSSRF GPDKLLQQDI SQRMNLQMDI DEIPGNSMFE 360 NNQTICSTSN NERPMLQYEI APDMPISVLT NVSGAEQKLH FMSEADFSSP NCLKSELWQE 420 ISFQSLLSGP DIVDADSLSR LNHHSDTHSS EADTNFLAAP NPSHTSNPSS MMVAAYGQDP 480 SLSVPQSLIS NGLSDAADEK SGEMQVSGSE MITCMHDSFG DSEQFATPGS TDGRHGASAI 540 IERIPEYGDK QLTDAEEPAA SMAKEPPLAQ GEAASDEKQD KGALFYEPPR FPSMDVPFVS 600 CDLVTSGDLQ EYSPLGIRQL MRSTMSVTTP LRLWGSPTHD ESPDVVLKSA AKSFISTPSI 660 LKKRPRDLSS PTPEKRMERK SRTEQDSGVL GTSSVSAQTS CMHAIKDKAI VTESVLCTNR 720 SSSFKPLEKK LEFCDENKEI LGESEQAKDG RNAQNNHTVD EHARGEQCST ANMVNTNDEP 780 PATVLVEHKD NDISDHGANA MYQKMNTNLE ALSACKEAFA KSKSGELIAE KSSPCIQMDY 840 EYVNILADTP GVKRGLESPS AWKSPWFIDM QYKGVILHQP SGYNL

Sequence ? help Back to Top

Protein Sequence Length: 885 aa Download sequence

IQSSPVMTSD KGKASKKAGE ASGQPSTTHE GKVSNEPQRQ RSLNGRTTGP TRRSTKGNWT  60
PEEDDILSRA VQTYNGKNWK KIAECFPDRT DVQCLHRWQK VLNPELIKGP WSKEEDDIIV  120
EMVKKYGPKK WSTIAQALPG RIGKQCRERW HNHLNPGINK DAWTQEEEIT LIHAHRMYGN  180
KWAELTKFLP GRTDNSIKNH WNSSVKKKID SYMSSGLLAQ VSRLPLIEHH AHFNSSPAIT  240
QQNSEDSDSN AVREVEDSSG CSQSSLAMVS CSQVQDTNLA LSCDLHVNAD TSKTEARDSQ  300
SSMCQEDYTS TEGAASALSE VHCHASSSRF GPDKLLQQDI SQRMNLQMDI DEIPGNSMFE  360
NNQTICSTSN NERPMLQYEI APDMPISVLT NVSGAEQKLH FMSEADFSSP NCLKSELWQE  420
ISFQSLLSGP DIVDADSLSR LNHHSDTHSS EADTNFLAAP NPSHTSNPSS MMVAAYGQDP  480
SLSVPQSLIS NGLSDAADEK SGEMQVSGSE MITCMHDSFG DSEQFATPGS TDGRHGASAI  540
IERIPEYGDK QLTDAEEPAA SMAKEPPLAQ GEAASDEKQD KGALFYEPPR FPSMDVPFVS  600
CDLVTSGDLQ EYSPLGIRQL MRSTMSVTTP LRLWGSPTHD ESPDVVLKSA AKSFISTPSI  660
LKKRPRDLSS PTPEKRMERK SRTEQDSGVL GTSSVSAQTS CMHAIKDKAI VTESVLCTNR  720
SSSFKPLEKK LEFCDENKEI LGESEQAKDG RNAQNNHTVD EHARGEQCST ANMVNTNDEP  780
PATVLVEHKD NDISDHGANA MYQKMNTNLE ALSACKEAFA KSKSGELIAE KSSPCIQMDY  840
EYVNILADTP GVKRGLESPS AWKSPWFIDM QYKGVILHQP SGYNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-106	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG031020.4