PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG031020.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 960aa MW: 105445 Da PI: 5.1943

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG031020.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.8	2.1e-12	36	74	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 d++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3BG031020.5 36 DDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 74 67899*****************.**********986 PP
2	Myb_DNA-binding	61.2	2.1e-19	80	126	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3BG031020.5 80 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 126 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	132	174	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3BG031020.5 132 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 174 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 960 aa Download sequence
MKGKSAMSHR GNGRSMGGPP ARHDAQPKEI GPPKRDDILS RAVQTYNGKN WKKIAECFPD 60 RTDVQCLHRW QKVLNPELIK GPWSKEEDDI IVEMVKKYGP KKWSTIAQAL PGRIGKQCRE 120 RWHNHLNPGI NKDAWTQEEE ITLIHAHRMY GNKWAELTKF LPGRTDNSIK NHWNSSVKKK 180 IDSYMSSGLL AQVSRLPLIE HHAHFNSSPA ITQQNSEDSD SNAVREVEDS SGCSQSSLAM 240 VSCSQVQDTN LALSCDLHVN ADTSKTEARD SQSSMCQEDY TSTEGAASAL SEVHCHASSS 300 RFGPDKLLQQ DISQRMNLQM DIDEIPGNSM FENNQTICST SNNERPMLQY EIAPDMPISV 360 LTNVSGAEQK LHFMSEADFS SPNCLKSELW QEISFQSLLS GPDIVDADSL SRLNHHSDTH 420 SSEADTNFLA APNPSHTSNP SSMMVAAYGQ DPSLSVPQSL ISNGLSDAAD EKSGEMQVSG 480 SEMITCMHDS FGDSEQFATP GSTDGRHGAS AIIERIPEYG DKQLTDAEEP AASMAKEPPL 540 AQGEAASDEK QDKGALFYEP PRFPSMDVPF VSCDLVTSGD LQEYSPLGIR QLMRSTMSVT 600 TPLRLWGSPT HDESPDVVLK SAAKSFISTP SILKKRPRDL SSPTPEKRME RKSRTEQDSG 660 VLGTSSVSAQ TSCMHAIKDK AIVTESVLCT NRSSSFKPLE KKLEFCDENK EILGESEQAK 720 DGRNAQNNHT VDEHARGEQC STANMVNTND EPPATVLVEH KDNDISDHGA NAMYQKMNTN 780 LEALSACKEA FAKSKSGELI AEKSSPCIQM DYEYVNILAD TPGVKRGLES PSAWKSPWFI 840 DMQYKGSYFI SPADTTYDAL GLMKRINVQS ASALADAREV LASGSQCGNK IFDEENKENI 900 DAENETGTGK PQNKIMAEAR VLDFNECATP VRTADNSVGG SLTKSVSSPI PSSHLLKNFR

Sequence ? help Back to Top

Protein Sequence Length: 960 aa Download sequence

MKGKSAMSHR GNGRSMGGPP ARHDAQPKEI GPPKRDDILS RAVQTYNGKN WKKIAECFPD  60
RTDVQCLHRW QKVLNPELIK GPWSKEEDDI IVEMVKKYGP KKWSTIAQAL PGRIGKQCRE  120
RWHNHLNPGI NKDAWTQEEE ITLIHAHRMY GNKWAELTKF LPGRTDNSIK NHWNSSVKKK  180
IDSYMSSGLL AQVSRLPLIE HHAHFNSSPA ITQQNSEDSD SNAVREVEDS SGCSQSSLAM  240
VSCSQVQDTN LALSCDLHVN ADTSKTEARD SQSSMCQEDY TSTEGAASAL SEVHCHASSS  300
RFGPDKLLQQ DISQRMNLQM DIDEIPGNSM FENNQTICST SNNERPMLQY EIAPDMPISV  360
LTNVSGAEQK LHFMSEADFS SPNCLKSELW QEISFQSLLS GPDIVDADSL SRLNHHSDTH  420
SSEADTNFLA APNPSHTSNP SSMMVAAYGQ DPSLSVPQSL ISNGLSDAAD EKSGEMQVSG  480
SEMITCMHDS FGDSEQFATP GSTDGRHGAS AIIERIPEYG DKQLTDAEEP AASMAKEPPL  540
AQGEAASDEK QDKGALFYEP PRFPSMDVPF VSCDLVTSGD LQEYSPLGIR QLMRSTMSVT  600
TPLRLWGSPT HDESPDVVLK SAAKSFISTP SILKKRPRDL SSPTPEKRME RKSRTEQDSG  660
VLGTSSVSAQ TSCMHAIKDK AIVTESVLCT NRSSSFKPLE KKLEFCDENK EILGESEQAK  720
DGRNAQNNHT VDEHARGEQC STANMVNTND EPPATVLVEH KDNDISDHGA NAMYQKMNTN  780
LEALSACKEA FAKSKSGELI AEKSSPCIQM DYEYVNILAD TPGVKRGLES PSAWKSPWFI  840
DMQYKGSYFI SPADTTYDAL GLMKRINVQS ASALADAREV LASGSQCGNK IFDEENKENI  900
DAENETGTGK PQNKIMAEAR VLDFNECATP VRTADNSVGG SLTKSVSSPI PSSHLLKNFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-94	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG031020.5