PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG031020.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 115aa    MW: 13549.5 Da    PI: 8.5047
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG031020.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding65.87.9e-212571148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l
  TRIDC3BG031020.8 25 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 71
                      79******************************.*************97 PP
2Myb_DNA-binding27.76.2e-0977107132
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg 32 
                       +++WT+eE+  l++a++++G++ W+   + ++
  TRIDC3BG031020.8  77 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP 107
                       689*******************.**9888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
ECFPDRTDVQ CLHRWQKVLN PELIKGPWSK EEDDIIVEMV KKYGPKKWST IAQALPGRIG  60
KQCRERWHNH LNPGINKDAW TQEEEITLIH AHRMYGNKWA ELTKFLPGSF SFHSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.11e-66MYB family protein