PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG032640.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 310aa    MW: 34369.3 Da    PI: 5.4148
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG032640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.5e-172370148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg W++eEde+l++ + ++G+g+W++++r  g+ R++k+c++rw +yl
  TRIDC3BG032640.1 23 RGLWSPEEDEKLYNHIIRYGNGCWSSVPRLAGLERCGKSCRLRWINYL 70
                      788*******************************************97 PP
2Myb_DNA-binding50.25.7e-1676119146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k++w++
  TRIDC3BG032640.1  76 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNFWNS 119
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRAMGREAAA AVACSSNKPK LRRGLWSPEE DEKLYNHIIR YGNGCWSSVP RLAGLERCGK  60
SCRLRWINYL RPDLKRGSFS QQEEDLIVSL HKILGNRWSQ IASQLPGRTD NEIKNFWNSC  120
IKKKLRQQRI DPTTHESLND AAAVAEPHDK CKQLVPAAED GCFGGSVGSD DFLAPHSPVD  180
CSFDPMSVTN VPAMRMQGSY SLCDYAGVGS DATTYSAYTG GGDSSSNSNG TGTGTWTCGN  240
VEPLPHMDMF RDDAEPYPFD PTKFSPWHQQ QPPDDDRGSA VFPIRSLSRD LPESCFELAR  300
GALEDEFDFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.17e-70MYB family protein