PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG032640.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 307aa    MW: 34010.9 Da    PI: 5.2214
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG032640.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.4e-172067148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg W++eEde+l++ + ++G+g+W++++r  g+ R++k+c++rw +yl
  TRIDC3BG032640.4 20 RGLWSPEEDEKLYNHIIRYGNGCWSSVPRLAGLERCGKSCRLRWINYL 67
                      788*******************************************97 PP
2Myb_DNA-binding50.35.6e-1673116146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k++w++
  TRIDC3BG032640.4  73 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNFWNS 116
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGREAAAAVA CSSNKPKLRR GLWSPEEDEK LYNHIIRYGN GCWSSVPRLA GLERCGKSCR  60
LRWINYLRPD LKRGSFSQQE EDLIVSLHKI LGNRWSQIAS QLPGRTDNEI KNFWNSCIKK  120
KLRQQRIDPT THESLNDAAA VAEPHDKCKQ LVPAAEDGCF GGSVGSDDFL APHSPVDCSF  180
DPMSVTNVPA MRMQGSYSLC DYAGVGSDAT TYSAYTGGGD SSSNSNGTGT GTWTCGNVEP  240
LPHMDMFRDD AEPYPFDPTK FSPWHQQQPP DDDRGSAVFP IRSLSRDLPE SCFELARGAL  300
EDEFDFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.14e-70MYB family protein