PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG034910.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 427aa MW: 44649 Da PI: 5.8228

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG034910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.3	1.1e-07	326	366	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P a K++ a++L +A +Y++ L TRIDC3BG034910.1 326 ARQRRERISERLRVLQKLVPGgA------KMDTASMLDEAANYLRFL 366 69****************966......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDPGFCNDMI LSESAWNSGG GDGGAAGDVV NVVDGSGMSV LERLVLDEAL AAAIMELQGI 60 QVPCGGGKPM AGGIEAASLA FGATGTGPVT PAYAEVDGVV LQRQQHQHRH QGVMGMPVDY 120 DLVPAARAVT LATVPAAPSF PKGAAAAVDR AGVADAAVFD SGNNAPASAV IAGMTRQWDE 180 ANGCAKRQRR SSRKRRAADA PCPAADGHSQ ENPLCSLLAS TNTGDRGIQI AFSSGGGAAP 240 SSKRTKPSLS STSSSISFDG RSSVNNGCDD VPQYEPDTEA LAQVKEMIYR AAAMRPLSLG 300 AEEEDTGERP SRRNVRISSD PQTVAARQRR ERISERLRVL QKLVPGGAKM DTASMLDEAA 360 NYLRFLKSQI RELQTLDRRN YGANAISNTG MAPMMIYNNM PAFAFPATGA GETLGRGGEE 420 AFISSRF

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDPGFCNDMI LSESAWNSGG GDGGAAGDVV NVVDGSGMSV LERLVLDEAL AAAIMELQGI  60
QVPCGGGKPM AGGIEAASLA FGATGTGPVT PAYAEVDGVV LQRQQHQHRH QGVMGMPVDY  120
DLVPAARAVT LATVPAAPSF PKGAAAAVDR AGVADAAVFD SGNNAPASAV IAGMTRQWDE  180
ANGCAKRQRR SSRKRRAADA PCPAADGHSQ ENPLCSLLAS TNTGDRGIQI AFSSGGGAAP  240
SSKRTKPSLS STSSSISFDG RSSVNNGCDD VPQYEPDTEA LAQVKEMIYR AAAMRPLSLG  300
AEEEDTGERP SRRNVRISSD PQTVAARQRR ERISERLRVL QKLVPGGAKM DTASMLDEAA  360
NYLRFLKSQI RELQTLDRRN YGANAISNTG MAPMMIYNNM PAFAFPATGA GETLGRGGEE  420
AFISSRF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	327	332	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	8e-34	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG034910.1