PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG035480.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 153aa    MW: 17620.6 Da    PI: 8.3288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG035480.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.3e-13348555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      h + Er+RR+++N++f++Lr+llP++      K +K ++L+kA  Y+k L+
  TRIDC3BG035480.3  3 HMMSERKRREKLNDSFHTLRSLLPPC-----SKKDKTTVLTKAAGYLKTLE 48
                      6789*********************9.....699**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
LYHMMSERKR REKLNDSFHT LRSLLPPCSK KDKTTVLTKA AGYLKTLEAQ VSELEEKNNK  60
LEKHIPTYDC EEDVPHHQRR QRAKVQITKA ASDEVVNLTV MVMVECDVVE LVLRILECLR  120
WMEQVSVMSV DADTYSPQVL LKAIASIKLR IVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1712ERKRRE
2813RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-19bHLH family protein