PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG036350.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 227aa MW: 25274.4 Da PI: 8.8557

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG036350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70	5.6e-22	45	168	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................................tekerrtraet 58 Y++Y++++GFs++ ++s++s+ ++ k+tf+C+k+g+++ ++++ +k+rr++ + TRIDC3BG036350.1 45 HYKAYSRRIGFSMKANTSRRSSYTNVLEKQTFCCNKSGRPKINDDAptpvferlssdsdgcgdgqdvgskkagcssykspggLVKKRRREFIK 137 5****************************************999********************************99***** PP FAR1 59 rtgCkaklkvkkekdgkwevtkleleHnHela 90 +tgC+ak++vk++ ++kw+vt ++ +HnH l TRIDC3BG036350.1 138 QTGCRAKMTVKLT-NNKWVVTGVVADHNHRLI 168 *********.9************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MPSNGGQGRT GSAALLGFDE NEVRSSPQEP YVGMEFDTVE GAKAHYKAYS RRIGFSMKAN 60 TSRRSSYTNV LEKQTFCCNK SGRPKINDDA PTPVFERLSS DSDGCGDGQD VGSKKAGCSS 120 YKSPGGLVKK RRREFIKQTG CRAKMTVKLT NNKWVVTGVV ADHNHRLIDK PSLTKYLRSH 180 QGIPPEEVEF LEHRCNMDTG RMMTVMFEFC GQAAIVLHDE NDKQHEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-15	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG036350.1