PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG037320.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 261aa MW: 27934.8 Da PI: 4.702

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG037320.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.1	2e-14	6	43	5	42
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +C+C+k++Cl++YC Cf+a ++C+e C+C++C+N+e++ TRIDC3BG037320.4 6 HCTCEKTQCLQRYCHCFEAWVFCDEGCSCQGCRNTEDN 43 8*********************************9975 PP
2	TCR	47.2	4.4e-15	84	121	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 + kgCnC++s+C+k+YCeCf++ + Cs++C+C++C N+ TRIDC3BG037320.4 84 HVKGCNCRNSECKKLYCECFKHSVGCSDKCQCTGCANT 121 689**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MDDLPHCTCE KTQCLQRYCH CFEAWVFCDE GCSCQGCRNT EDNSDEVDER AECIMKKKPD 60 AFKPKIIAGD GPGLQQQQQA AGVHVKGCNC RNSECKKLYC ECFKHSVGCS DKCQCTGCAN 120 TFGVKGAAQQ AHSDGPQGTS GGSGETLARS NGSSAIINHD MASQSTETSI MDDIHIPSEL 180 SHMDADLGPP TQALGDGGLE DIIFHTDFEH NIDPQAHQGL AQQADASLSN DANSLLEQGP 240 SKTDTCDLLH HGSQINKLGG I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04850.1	1e-29	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG037320.4