PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG037320.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 120aa MW: 13664.7 Da PI: 6.6644

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG037320.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47	5.1e-15	6	43	5	42
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +C+C+k++Cl++YC Cf+a ++C+e C+C++C+N+e++ TRIDC3BG037320.6 6 HCTCEKTQCLQRYCHCFEAWVFCDEGCSCQGCRNTEDN 43 8*********************************9975 PP
2	TCR	31	5e-10	84	113	2	31
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeC 31 + kgCnC++s+C+k+YCeCf+ +++ C TRIDC3BG037320.6 84 HVKGCNCRNSECKKLYCECFKVRAYSRLLC 113 689*****************9988766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence
MDDLPHCTCE KTQCLQRYCH CFEAWVFCDE GCSCQGCRNT EDNSDEVDER AECIMKKKPD 60 AFKPKIIAGD GPGLQQQQQA AGVHVKGCNC RNSECKKLYC ECFKVRAYSR LLCIYLFCLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-20	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG037320.6