PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG038730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 240aa    MW: 26839.1 Da    PI: 7.2197
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG038730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.26.7e-174390148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT eEd++lv ++ q+G g+W+  ar  g++R +k+c++rw++yl
  TRIDC3BG038730.1 43 KGPWTLEEDLILVGYISQHGEGSWDNLARSAGLNRNGKSCRLRWLNYL 90
                      79********************************************97 PP
2Myb_DNA-binding49.97.5e-1696139146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ ++eEd  + +++ +lG++ W+ Ia++++ gRt++++k++w++
  TRIDC3BG038730.1  96 RGSISPEEDMVIRELHSRLGNK-WAEIAKHLP-GRTDNEVKNYWRT 139
                       7888******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
LVSALLSFTE DNTGLLCCSR EKKNLTRMAR MMCGRAGEPA VRKGPWTLEE DLILVGYISQ  60
HGEGSWDNLA RSAGLNRNGK SCRLRWLNYL RPGLRRGSIS PEEDMVIREL HSRLGNKWAE  120
IAKHLPGRTD NEVKNYWRTR VHKKAPHQNQ LPAQPASEAT TSVSASASTS HASSTVGDEY  180
TQTSFPYPEL SWVATDHHET VDVGAPTARF CPSEFGGNFW NVPDNFWETL PLSDPVYEAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.12e-56MYB family protein