PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG039040.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 248aa MW: 27324.2 Da PI: 9.5165

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG039040.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.8e-19	105	158	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++keq + Lee F+ n+++s +++e LA kl+L rqV vWFqNrRa+ k TRIDC3BG039040.2 105 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRARTK 158 67789***********************************************98 PP
2	HD-ZIP_I/II	119.3	2.1e-38	105	192	2	89
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 kk+rlskeq++lLEesF+ +++L+p++K++la +L+l+prqv+vWFqnrRARtk+k++E+++e+Lkr++ +l+een+rL++eveeLr+ TRIDC3BG039040.2 105 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKHTEMECEYLKRCFGSLTEENRRLQREVEELRA 192 9*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
LGLGLLLSSS SSPFPCSCFR IGLSPVMGAT SPSGLELTMA VPGLSSSSGS EGFVCNNNIS 60 NNGGGNMRGL DMNQPASGGE EEDFLMGGVE EDEEERGAGG PHRPKKLRLS KEQSRLLEES 120 FRLNHTLSPK QKEALAIKLK LRPRQVEVWF QNRRARTKLK HTEMECEYLK RCFGSLTEEN 180 RRLQREVEEL RAMRMAPPTV LSPHTRQPLP ASALTMCPRC ERVTAATGPR ITRPPASPFH 240 PRRPSAAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	1e-63	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG039040.2