PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG039250.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 76aa    MW: 8953.35 Da    PI: 8.5035
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG039250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH41.32.6e-13227126
                      --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                      +ktelC+ + +tG C+y d+C+FaHg
  TRIDC3BG039250.1  2 FKTELCNKWEETGACPYCDQCQFAHG 27
                      79***********************9 PP
2zf-CCCH192.5e-064065126
                      --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                      ykte Cr  + +  C+yG rC+F H+
  TRIDC3BG039250.1 40 YKTEVCRMVLNGEVCPYGHRCHFRHS 65
                      9******999966**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MFKTELCNKW EETGACPYCD QCQFAHGVSE LRPVIRHPRY KTEVCRMVLN GEVCPYGHRC  60
HFRHSLTAAE RLLRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.19e-43C3H family protein