PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG039980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 293aa    MW: 31407.2 Da    PI: 4.2713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG039980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-2091142156
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                       ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAa+ +++a+ +l+g+
  TRIDC3BG039980.1  91 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDNAAIQLRGA 142
                       69********.**********88.....55*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSRSRTVRIY WDDPDVTDSS SEDDEGCAAR RVGRMVRELP PAPAPLVQAA AAAPSPEQCS  60
AGDDDLPRRV GGCTRARKRL AKGGGSAAQS TKFRGVRRRP WGKYAAEIRD PWRGVRVWLG  120
TFDTAEEAAR VYDNAAIQLR GATATTNFST SSTNSEGAQE DLTAAGYESG AESSQAVSSP  180
TSVLRKVPSM SSLAEDRGDS EACQGDAAAG SSLSVPEELG EFVPFEDAPV YSSSSFWDFE  240
PQSGFLYAEP SSAEEASWDA SAGGEPWAAP VQENDYFQDL RDLFPLNQLP AIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.16e-26ERF family protein