PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG041570.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 414aa MW: 47384.8 Da PI: 9.9859

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG041570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.1	1.7e-19	112	197	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk+ GF v ++++++ ++ + + t+ C+++gk++ ++k+ + +++++tr++C ak++ ++ ++k+++t++ l+HnH+++p TRIDC3BG041570.1 112 NFYKDYAKKEGFGVIRRTTRHG-EDSKLVYFTLACNRQGKAQYSSKN---SFKPNPSTRMQCPAKINFSRC-EEKFCITSITLDHNHPISP 197 6*************999998.6666999*********9999...999**************.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
FSSSLQTWPS NSFTIPPLLT SDSESISLLR NLQLVQRSSI PSLLVRSFKF VMEPNLIFGE 60 VVDKNRAFED ADEDAFIFEE IRDSSDDQQV EQIMMLQPKK GMTFDSEDAA VNFYKDYAKK 120 EGFGVIRRTT RHGEDSKLVY FTLACNRQGK AQYSSKNSFK PNPSTRMQCP AKINFSRCEE 180 KFCITSITLD HNHPISPSKA RFLRCHKKLD LHAKRRLELN DQAGIRLNKI FGSLVMEAGG 240 YGNLEFGEKE CRNYLQETRR LKLGAGDAHA VYQYFLRMQS KDPDFFHLMD VDKDGRLRNV 300 FWADARKVDA YRASHAVQVQ AEDPTSKHED TMLNKEKLVL SPIPVRSAGR PRSKRKISKV 360 DQVIQKLRAK KRQVPTSTTE VQTHKGRKNY VSKSKSGLQS SKQTEGNIQY EGYG

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

FSSSLQTWPS NSFTIPPLLT SDSESISLLR NLQLVQRSSI PSLLVRSFKF VMEPNLIFGE  60
VVDKNRAFED ADEDAFIFEE IRDSSDDQQV EQIMMLQPKK GMTFDSEDAA VNFYKDYAKK  120
EGFGVIRRTT RHGEDSKLVY FTLACNRQGK AQYSSKNSFK PNPSTRMQCP AKINFSRCEE  180
KFCITSITLD HNHPISPSKA RFLRCHKKLD LHAKRRLELN DQAGIRLNKI FGSLVMEAGG  240
YGNLEFGEKE CRNYLQETRR LKLGAGDAHA VYQYFLRMQS KDPDFFHLMD VDKDGRLRNV  300
FWADARKVDA YRASHAVQVQ AEDPTSKHED TMLNKEKLVL SPIPVRSAGR PRSKRKISKV  360
DQVIQKLRAK KRQVPTSTTE VQTHKGRKNY VSKSKSGLQS SKQTEGNIQY EGYG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	350	360	RPRSKRKISKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	9e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG041570.1