PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG041700.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 242aa    MW: 27515.3 Da    PI: 6.5144
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG041700.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.7e-1525120294
                       EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       +k+l +sd +++gr+vlpkk  e++       ++ ++ l++ d ++   W++k++y  ++ks++yvl+ ++ ++v+ ++L++gDf++++ d++
  TRIDC3BG041700.3  25 QKELRNSDISQLGRIVLPKKESEAYlpilT--SKDGRSLRMHDlLNAHLWTFKYRYwpNNKSRMYVLE-NTGDYVRTHNLRVGDFIMIYKDDD 114
                       79999**********************653..445678*****8888*********89999999**99.********************5554 PP

                       SEE..EE CS
                B3  88 sefelvv 94 
                        + ++v+
  TRIDC3BG041700.3 115 -KNRFVI 120
                       .433344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
GPRGGVRWMP AIRPHQVAGL RVILQKELRN SDISQLGRIV LPKKESEAYL PILTSKDGRS  60
LRMHDLLNAH LWTFKYRYWP NNKSRMYVLE NTGDYVRTHN LRVGDFIMIY KDDDKNRFVI  120
RAKKAGDDLV ASLPQFHEHI SSILPIPEVD DYVSLIPPPA DISAFVPQAD ENYEMFDGIF  180
NSLPEIPVAN VRYSDFFDPF SDCMDMSNPG LNANNSANLG SHFHDERTGL SLFPNPTSGP  240
LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.13e-44B3 family protein