PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042930.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 235aa    MW: 25890.5 Da    PI: 4.8622
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042930.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52e-152670147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ 
  TRIDC3BG042930.4 26 RGSFSQQEEDAIVGLHEILGNR-WSQIASHLP-GRTDNEIKNFWNSC 70
                      899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MNPGLQRCGK SCRLRWINYL RPDLKRGSFS QQEEDAIVGL HEILGNRWSQ IASHLPGRTD  60
NEIKNFWNSC LKKKLRQRGI DPSTHKPISG VVGVEPDQAS KDERPQAADG LALKQQQVFD  120
PFPVADTFGA GFDGAGMPLY DHLGGKDAAG FVDYSSVLDV SENLGYGESS SNSSNWNSAP  180
EASNALEGEA LHWASESKVE PFAGYAGDED DKFALPCHGQ QEHSMAHFDF NLEYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17177LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-49MYB family protein