PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG043590.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 245aa MW: 26465.8 Da PI: 7.1307

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG043590.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.5e-17	29	76	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde lv+ v++ G g+W+t +r+ g+ R++k+c++rw +yl TRIDC3BG043590.2 29 RGPWTAEEDEVLVRFVAREGEGRWRTLPRRAGLLRCGKSCRLRWMNYL 76 89****************************99**********97 PP
2	Myb_DNA-binding	46.3	9.5e-15	83	127	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ ++E++l++++++ lG++ W++Ia +++ gRt++++k++w+++l TRIDC3BG043590.2 83 GPIAEDEEDLILRLHRVLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 127 666799*************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MARRKPPAQH GARSEDGQAQ TTAPPPLKRG PWTAEEDEVL VRFVAREGEG RWRTLPRRAG 60 LLRCGKSCRL RWMNYLRPDI KRGPIAEDEE DLILRLHRVL GNRWSLIAGR LPGRTDNEIK 120 NYWNSHLSKK LIAQGLDPRT HMPLAAAPGK TAAATHKTTA APVVVPPQPP PPPGPVLPTS 180 SAAGTGSDGH DNPGDGGNDD LAATMSVDAD GFEGFGDQLL ADYAASRGGF EDVMGCPMVD 240 DDTFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	7e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG043590.2