PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG044000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 371aa    MW: 38994.1 Da    PI: 11.9087
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG044000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.49.3e-31193286187
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k+ tpsdv+k++rlv+pk++ae+h        g  + ++  l +ed  g++W+++++y+++s++yvltkGW++Fvk++gL +gD+v F+++
  TRIDC3BG044000.2 193 FDKTVTPSDVGKLNRLVIPKQHAEKHfplqlpaaG-GESKGLLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRS 284
                       89*******************************53.456888*************************************************66 PP

                       SS CS
                B3  86 gr 87 
                         
  TRIDC3BG044000.2 285 AA 286
                       44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
APLLKWTAPA ASPTTPAAAA PPRTSSRRWP PPRLPRRGRS SAWAAAPAPC STRPSRAPRP  60
TLAARAPAVR RRGSCRRPGS RAWCRSRTGG GARRSTSGTS ACGSARSPGR PTPRAPTTSP  120
RSASAAATPS PTSARSRTPT PTPPPSSASS PRAPRPRSST CCASTPTSTS STSRGADGHA  180
STPSPAAARE HLFDKTVTPS DVGKLNRLVI PKQHAEKHFP LQLPAAGGES KGLLLNFEDA  240
AGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KGLGAGDVVG FYRSAAGSTG EDTKLFIDCK  300
LRPDTNSPAS ADPVDQSAPV QKAVRLFGVD LLTAPASPEQ GMPGCKRARD LVKSPPPKVA  360
FKKQCIELAL A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-55RAV family protein