PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG044630.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 223aa    MW: 23428.3 Da    PI: 7.0052
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG044630.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.43.8e-099351846
                      HTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 18 qlGggtWktIartmgkgRtlkqcksrwqk 46
                        G++ W+ Ia++++ gRt++++k++w++
  TRIDC3BG044630.2  9 SIGSR-WSIIASKLP-GRTDNDVKNYWNT 35
                      56889.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVICSLYNSI GSRWSIIASK LPGRTDNDVK NYWNTKLKKK AMAMHQHQQQ QYHHHGSAGR  60
GHTGGATIAT PPPAPQSQCA SYMQPSPASA SSAVTTASGD AASFGAMYSP SHQAPLAHYN  120
VNAAAPLAEF SAMPMPAAAN SWAINMAFED MFLPELVGGG DFSQADLFGG FGASLLQAQD  180
SRASSLQELS ACYFPNVQAE MWAAAADHVN VKPPGAGLCP SLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.15e-19MYB family protein