PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 121aa    MW: 13264.3 Da    PI: 10.5116
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP46.65.7e-1565118471
           E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       ++Lr +++    ++ek+e+ g++t+ne           n+rRR+YD++NVL al++i+k ek+eirw+g
  TRIDC3BG045260.1  65 WGLREYSKI---VCEKVEAkGRTTYNE-----------NIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 118
                       567777777...777776667777763...........68*******************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MAPPRGGAAA AAPAALDLTG VHILEASSVP PLPERGGNAV QRKEAVDPDK DRKKEKAAAP  60
RITGWGLREY SKIVCEKVEA KGRTTYNENI RRRVYDAFNV LIALRVIAKE KKEIRWMGLS  120
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.19e-22E2F/DP family protein