PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045260.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 252aa    MW: 28664.8 Da    PI: 10.0837
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045260.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP74.21.4e-2355131371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse...........dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr +++    ++ek+e+ g++t+neva+e++se           d+kn+rRR+YD++NVL al++i+k ek+eirw+g
  TRIDC3BG045260.2  55 GWGLREYSKI---VCEKVEAkGRTTYNEVADEIYSElksmahigqgfDEKNIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 131
                       689*******...*******9**************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
AAAPAALDLT GVHILEASSV PPLPERGGNA VQRKEAVDPD KDRKKEKAAA PRITGWGLRE  60
YSKIVCEKVE AKGRTTYNEV ADEIYSELKS MAHIGQGFDE KNIRRRVYDA FNVLIALRVI  120
AKEKKEIRWM GLSNYRYEKI KKLEEVRKEL TNKIRNKKAL LQEIEKQFDD LQNIKLRNQT  180
LESSAENVNG IRLPFVLVKT SRKARVEIEI SDDSKFAHFE FNGAPFTLHD DLSILEGIRR  240
NSIGRAGRAT LH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.14e-62E2F/DP family protein