PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045260.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 152aa    MW: 17158.8 Da    PI: 9.7006
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045260.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP75.84.5e-2454130371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse...........dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr +++    ++ek+e+ g++t+neva+e++se           d+kn+rRR+YD++NVL al++i+k ek+eirw+g
  TRIDC3BG045260.3  54 GWGLREYSKI---VCEKVEAkGRTTYNEVADEIYSElksmahigqgfDEKNIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 130
                       689*******...*******9**************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
AAPAALDLTG VHILEASSVP PLPERGGNAV QRKEAVDPDK DRKKEKAAAP RITGWGLREY  60
SKIVCEKVEA KGRTTYNEVA DEIYSELKSM AHIGQGFDEK NIRRRVYDAF NVLIALRVIA  120
KEKKEIRWMG LSNYRYEKIK KLEVSFCAYF AG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.13e-33E2F/DP family protein