PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045380.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 587aa    MW: 62841 Da    PI: 9.2861
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045380.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.83.6e-22141436126
               NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk...sgyWkatgkdk 90 
                         hP+d el++ yL + v++ + +  ++i+e+d+y + P+dL +     +++ ++++wyfF++ + k+++g+rk+r++    +g W++    k
  TRIDC3BG045380.2  14 ASHPSDLELISTYLIPWVSTGERPW-KFIHEADVYAATPQDLARayapaTASDGQESWYFFTTLRAKSRRGQRKSRTVGsgdHGCWHSERAAK 105
                       569*******************999.89**************74466655555788********************876455789******** PP

               NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmhey 126
                       ++++   +++++g ++ + f ++++ + +++ W+m e 
  TRIDC3BG045380.2 106 PLFAGigHSRQIGYRQAFSFATKEDGRLVRSGWLMAEI 143
                       ***99889999***********9999*********997 PP
2NAM64.92.4e-202854136126
               NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra..tksgyWkatgkdke 91 
                         hP+d+ l++ yL+++v++ ++++ ++ +++d+y++ P  L +     +++ +ek wyfF+    k+a+g+r+ r+  t +g W++    k+
  TRIDC3BG045380.2 285 ASHPSDQVLIKSYLTPRVASGQHPC-QFTHDADVYTASPGALTRkyppaMASDGEKAWYFFTLLPAKSAHGQRRPRTvgTGEGCWHSEAGVKP 376
                       569*******************999.89**************74467755566888********************6347799********** PP

               NAM  92 vlskkgelvglkktLvfy...kgrapkgektdWvmhey 126
                       vl+ +g+ +g ++ + f    +g++ ++ ++ W+m e 
  TRIDC3BG045380.2 377 VLD-GGHPIGWRQFFSFMtkeEGQRVRSIRSGWIMVEI 413
                       ***.**************77668888899******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    
MAPIRRAAQR PDFASHPSDL ELISTYLIPW VSTGERPWKF IHEADVYAAT PQDLARAYAP  60
ATASDGQESW YFFTTLRAKS RRGQRKSRTV GSGDHGCWHS ERAAKPLFAG IGHSRQIGYR  120
QAFSFATKED GRLVRSGWLM AEIGLNPDAS AEEELILCKV YRSPRVGTGQ RSTAPAATGV  180
GPVRIGRGKA SEEDSSSSEE GTPRAAGPGC YSAQQPARVS ASTSGTLSME ESDSEQGSTS  240
QGGDGGVIGT SPSATPPRVP RSEALRAAHL PRIPTVPAAQ RPDFASHPSD QVLIKSYLTP  300
RVASGQHPCQ FTHDADVYTA SPGALTRKYP PAMASDGEKA WYFFTLLPAK SAHGQRRPRT  360
VGTGEGCWHS EAGVKPVLDG GHPIGWRQFF SFMTKEEGQR VRSIRSGWIM VEIGLDHGQQ  420
EGPSDELVLC KVYRSPRAGP VEPPAAAGRK RKSGDNYSAS AAPVLTLGPA PGARNSTAAS  480
TSSSGHKKRK THSRNSGHVM RPARGVLKLT RPATSGRKKS TSAACTRCGM EPAESHRGTP  540
DAPAEEEDGS ETDLDEDDPM TGDSGAPHCL KPGESSGCTR PFYQFKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1449490RKRKSGDNYSASAAPVLTLGPAPGARNSTAASTSSSGHKKRK
2487492KKRKTH
3488493KKRKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.16e-15NAC family protein