PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045530.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 230aa    MW: 25752.8 Da    PI: 10.5445
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045530.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix461.4e-1418104186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W++ e+ aL++a  ++  +l+rg+l++p+W+ev++++       ++r   r+ +qCk++ + l+k+yk+++++ +       s +p+f+ql+
  TRIDC3BG045530.3  18 CWSEGETAALVDAWGSRYIDLNRGSLRQPQWREVADAVntrpgasARRRPPRTDIQCKNRVDTLKKKYKAERARGGP------SPWPFFRQLD 104
                       7*******************************************999999*********************999886......46******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYIDLNR GSLRQPQWRE VADAVNTRPG  60
ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWPFF RQLDVLVGPT LSAAAAKKPS  120
PPRALPMLRR RMSPSRSPSP PSPAPPMALP LPNYRRGSNL PAADLFHKAA AAAAAADSDS  180
DDGYNNNNNY DDDEGSSCSW RWWGRRWRQQ KEEGRGRRFW GASDGYGDIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-30Trihelix family protein