PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG045780.17

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 531aa MW: 57731 Da PI: 4.6164

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG045780.17	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	290	329	13	52
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 + L+++Fek++yps+ ++e L ++lgLt q++ WF R TRIDC3BG045780.17 290 QKLKAYFEKEPYPSRPAKESLGQELGLTFHQITRWFSSTR 329 68**********************************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MNSKGAHLLF MTHGRQKVFP ESTSNGLNQI GASDLPSDDS EEDYDPTLAE GDTVDEDKSS 60 AEDGDEGSDS DDLDFITSSD ESEPSKKKKS ESKNKNTVND LALPSDDSED DDFDPEGPNS 120 SEDQKTKTNS DESDFTSDSD DFCAEISKSS GKDKVSAPSF SDQTNGVDIM EAELEQDSVL 180 PASNRRQVGT LDYKKLYDEA YGKETTDSSD EKEWSGHSPN GNPEDSDTDS FAGPLKPAKT 240 RRARGGRQNN ERTAQSERHS GSVSEQHPEV LSNGTSSTAR KKGYGPIVNQ KLKAYFEKEP 300 YPSRPAKESL GQELGLTFHQ ITRWFSSTRH YSRVTATKKG KRSENYTAEN NDGIAADSIQ 360 QREPNGSVLG KPNVDRNGII SEERMAQKNL DEGEKEDTPF RQRISCEQTL DGTPANKHNT 420 ANSREVDPPI GAPGGNQQSD TSRNAEDTPL GQDIGCEQTV AAINQNCTIG SSNVGSPKGV 480 PGGNKRLNNS PSVGSPRRGS AEKNIPGLEH VDEARRKAIL RELRKMKAAG K

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MNSKGAHLLF MTHGRQKVFP ESTSNGLNQI GASDLPSDDS EEDYDPTLAE GDTVDEDKSS  60
AEDGDEGSDS DDLDFITSSD ESEPSKKKKS ESKNKNTVND LALPSDDSED DDFDPEGPNS  120
SEDQKTKTNS DESDFTSDSD DFCAEISKSS GKDKVSAPSF SDQTNGVDIM EAELEQDSVL  180
PASNRRQVGT LDYKKLYDEA YGKETTDSSD EKEWSGHSPN GNPEDSDTDS FAGPLKPAKT  240
RRARGGRQNN ERTAQSERHS GSVSEQHPEV LSNGTSSTAR KKGYGPIVNQ KLKAYFEKEP  300
YPSRPAKESL GQELGLTFHQ ITRWFSSTRH YSRVTATKKG KRSENYTAEN NDGIAADSIQ  360
QREPNGSVLG KPNVDRNGII SEERMAQKNL DEGEKEDTPF RQRISCEQTL DGTPANKHNT  420
ANSREVDPPI GAPGGNQQSD TSRNAEDTPL GQDIGCEQTV AAINQNCTIG SSNVGSPKGV  480
PGGNKRLNNS PSVGSPRRGS AEKNIPGLEH VDEARRKAIL RELRKMKAAG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	4e-08	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG045780.17