PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG045780.19

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 516aa MW: 55981 Da PI: 4.4869

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG045780.19	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.9e-09	275	314	13	52
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 + L+++Fek++yps+ ++e L ++lgLt q++ WF R TRIDC3BG045780.19 275 QKLKAYFEKEPYPSRPAKESLGQELGLTFHQITRWFSSTR 314 68**********************************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MGVFPESTSN GLNQIGASDL PSDDSEEDYD PTLAEGDTVD EDKSSAEDGD EGSDSDDLDF 60 ITSSDESEPS KKKKSESKNK NTVNDLALPS DDSEDDDFDP EGPNSSEDQK TKTNSDESDF 120 TSDSDDFCAE ISKSSGKDKV SAPSFSDQTN GVDIMEAELE QDSVLPASNR RQVGTLDYKK 180 LYDEAYGKET TDSSDEKEWS GHSPNGNPED SDTDSFAGPL KPAKTRRARG GRQNNERTAQ 240 SERHSGSVSE QHPEVLSNGT SSTARKKGYG PIVNQKLKAY FEKEPYPSRP AKESLGQELG 300 LTFHQITRWF SSTRHYSRVT ATKKGKRSEN YTAENNDGIA ADSIQQREPN GSVLGKPNVD 360 RNGIISEERM AQKNLDEGEK EDTPFRQRIS CEQTLDGTPA NKHNTANSRE VDPPIGAPGG 420 NQQSDTSRNA EDTPLGQDIG CEQTVAAINQ NCTIGSSNVG SPKGVPGGNK RLNNSPSVGS 480 PRRGSAEKNI PGLEHVDEAR RKAILRELRK MKAAGK

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MGVFPESTSN GLNQIGASDL PSDDSEEDYD PTLAEGDTVD EDKSSAEDGD EGSDSDDLDF  60
ITSSDESEPS KKKKSESKNK NTVNDLALPS DDSEDDDFDP EGPNSSEDQK TKTNSDESDF  120
TSDSDDFCAE ISKSSGKDKV SAPSFSDQTN GVDIMEAELE QDSVLPASNR RQVGTLDYKK  180
LYDEAYGKET TDSSDEKEWS GHSPNGNPED SDTDSFAGPL KPAKTRRARG GRQNNERTAQ  240
SERHSGSVSE QHPEVLSNGT SSTARKKGYG PIVNQKLKAY FEKEPYPSRP AKESLGQELG  300
LTFHQITRWF SSTRHYSRVT ATKKGKRSEN YTAENNDGIA ADSIQQREPN GSVLGKPNVD  360
RNGIISEERM AQKNLDEGEK EDTPFRQRIS CEQTLDGTPA NKHNTANSRE VDPPIGAPGG  420
NQQSDTSRNA EDTPLGQDIG CEQTVAAINQ NCTIGSSNVG SPKGVPGGNK RLNNSPSVGS  480
PRRGSAEKNI PGLEHVDEAR RKAILRELRK MKAAGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	4e-08	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG045780.19