PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG046050.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 388aa    MW: 41068 Da    PI: 6.2709
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG046050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.29.3e-18261295135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC3BG046050.1 261 CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRL 295
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEATVPDYYG RDKKGSDLFV VDDLLALPCD DDEEEEEGVG EAPFLPANSA SAAAIVVKQE  60
AGFGNASADS STVTALDSCS NSFSGLADGD FSGGLCEPYD QLAELEWLSN YMGEGEESFA  120
TEDLHKLQLI SGIPSGGFPS ANGPPAPAAT AATAQPGMFL PEGPVPAKAR SKRSRVAPGN  180
WSSRLLVLPP APASPPSPAS MAISPAESGV SAQAFHVKKP SKPAKKKEVP PQVQAQAQAQ  240
SVSSPTAPSG VTAAANEGRR CLHCETDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR  300
PAASPTFVTS RHSNSHRKVL ELRRQREMHH YHQPSQLQQH AVAGGVGRIM HMESHLLFDG  360
PAAPPILGGG DDFLIHHHLG ADYRQQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-62GATA family protein