PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG047660.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 101aa    MW: 11795.5 Da    PI: 9.6892
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG047660.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.76.4e-23957149
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      kri+n ++rq tf kRr g++KKA EL vLCda+ ++++fs +gkly y
  TRIDC3BG047660.2  9 KRIDNPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYQY 57
                      79*********************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MGRGRSEIKR IDNPTQRQST FYKRRDGLFK KARELAVLCD ADLLLLLFSA SGKLYQYLAP  60
TVPSVKEFVE RYEAATHTKV WSDIRQVREW YYCSASIQIS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.14e-18MIKC_MADS family protein