PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG048040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 391aa    MW: 43456.1 Da    PI: 10.4523
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG048040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.73.2e-2122121199
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       ffkvl     +k+ rl +p kf++++        +g ke s+  tle +sgr+W+v +  r++ +++++t+GW +Fv+++ L+e +f+vF++d
  TRIDC3BG048040.1  22 FFKVL--IGDFKK-RLKIPPKFCKHIpweasrkaKGLKEASMAATLEGPSGRTWQVVI--RRTAEGTFFTAGWAKFVQDQALRELEFLVFRHD 109
                       66666..555555.6********888********6666799*****************..*******************************99 PP

                       SSSEE..EEEEE-S CS
                B3  86 grsefelvvkvfrk 99 
                       g ++f    +vf+k
  TRIDC3BG048040.1 110 GGTSF--AAMVFDK 121
                       87777..7777766 PP
2B350.73.2e-16291377598
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       +++ +v  s ++++p  f ++h   ++e+++++l+d+ g+ W   +i  ++++r  l++GW  F++ n L+egD +vF+l+g  ef  +v+vf
  TRIDC3BG048040.1 291 MSTMHVYYSFMMRFPTGFSRQHL--PREKTEMVLRDPGGKAWAALYI-PGTRDR--LSRGWCAFARGNCLEEGDCCVFELVGAAEF--RVHVF 376
                       6788999999*********9995..345679***************4.444445..9***********************997777..99999 PP

                       - CS
                B3  98 r 98 
                       r
  TRIDC3BG048040.1 377 R 377
                       8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
FRSMPDTERQ SPWASVERRP HFFKVLIGDF KKRLKIPPKF CKHIPWEASR KAKGLKEASM  60
AATLEGPSGR TWQVVIRRTA EGTFFTAGWA KFVQDQALRE LEFLVFRHDG GTSFAAMVFD  120
KSACEREDLL LAGDAPRPRR KRGRPRTASR AVDDSAGMEL VPYRAPAEQL PQVACSDRMP  180
ESDKSNGSAG HPGPMKAEAG AGELPLCLIA PPPSESGQLP PGRLPAGTKD GCAVKTRSIH  240
VDLAAASIPP SVRKYNGYVS RRRPVASAER QRAMELARAF RSSLPYCVIR MSTMHVYYSF  300
MMRFPTGFSR QHLPREKTEM VLRDPGGKAW AALYIPGTRD RLSRGWCAFA RGNCLEEGDC  360
CVFELVGAAE FRVHVFRVVE PAVPAVRLRL A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137141RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-26B3 family protein