PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG048040.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 406aa    MW: 44898.8 Da    PI: 10.2256
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG048040.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.73.5e-2119118199
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       ffkvl     +k+ rl +p kf++++        +g ke s+  tle +sgr+W+v +  r++ +++++t+GW +Fv+++ L+e +f+vF++d
  TRIDC3BG048040.3  19 FFKVL--IGDFKK-RLKIPPKFCKHIpweasrkaKGLKEASMAATLEGPSGRTWQVVI--RRTAEGTFFTAGWAKFVQDQALRELEFLVFRHD 106
                       66666..555555.6********888********6666799*****************..*******************************99 PP

                       SSSEE..EEEEE-S CS
                B3  86 grsefelvvkvfrk 99 
                       g ++f    +vf+k
  TRIDC3BG048040.3 107 GGTSF--AAMVFDK 118
                       87777..7777766 PP
2B350.63.4e-16306392598
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       +++ +v  s ++++p  f ++h   ++e+++++l+d+ g+ W   +i  ++++r  l++GW  F++ n L+egD +vF+l+g  ef  +v+vf
  TRIDC3BG048040.3 306 MSTMHVYYSFMMRFPTGFSRQHL--PREKTEMVLRDPGGKAWAALYI-PGTRDR--LSRGWCAFARGNCLEEGDCCVFELVGAAEF--RVHVF 391
                       6788999999*********9995..345679***************4.444445..9***********************997777..99999 PP

                       - CS
                B3  98 r 98 
                       r
  TRIDC3BG048040.3 392 R 392
                       8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MPDTERQSPW ASVERRPHFF KVLIGDFKKR LKIPPKFCKH IPWEASRKAK GLKEASMAAT  60
LEGPSGRTWQ VVIRRTAEGT FFTAGWAKFV QDQALRELEF LVFRHDGGTS FAAMVFDKSA  120
CEREDLLLAG DAPRPRRKRG RPRTASRAVD DSAGMELVPY RAPAEQLPQV ACSDRMPESD  180
KSNDAMAAMF SVQHNACNGL AGSAGHPGPM KAEAGAGELP LCLIAPPPSE SGQLPPGRLP  240
AGTKDGCAVK TRSIHVDLAA ASIPPSVRKY NGYVSRRRPV ASAERQRAME LARAFRSSLP  300
YCVIRMSTMH VYYSFMMRFP TGFSRQHLPR EKTEMVLRDP GGKAWAALYI PGTRDRLSRG  360
WCAFARGNCL EEGDCCVFEL VGAAEFRVHV FRVVEPAVPA VRLRLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134138RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-25B3 family protein