PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG048160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 217aa    MW: 23389.2 Da    PI: 7.0293
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG048160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.48.1e-141462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W+ eEd +l + v+++ +  +W t +++ g++R++k+c++rw++yl
  TRIDC3BG048160.1 14 RGPWSREEDAILRNFVQRFANAgNWITLPQKAGLNRCGKSCRLRWLNYL 62
                      89******************999************************97 PP
2Myb_DNA-binding43.47.8e-1469111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +T+eEd l++ +    G++ W+ Ia++++ gRt++++k++w++
  TRIDC3BG048160.1  69 GGFTEEEDSLILSLYGDIGSR-WSVIAAKLP-GRTDNDVKNHWNT 111
                       569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MGRSPCCDKA SVKRGPWSRE EDAILRNFVQ RFANAGNWIT LPQKAGLNRC GKSCRLRWLN  60
YLRPALRHGG FTEEEDSLIL SLYGDIGSRW SVIAAKLPGR TDNDVKNHWN TKLKKRYYSL  120
TAAPSTPPTG GDAIASADSP HGVDQSSIPP PAPALVNLDA ALATVDDGGE LTHESEQLYA  180
ELMGLIEPQS TTHTSTGEVM SSPSSSSQPP FGASPTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.13e-65MYB family protein