PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG048990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 172aa    MW: 17657 Da    PI: 10.7496
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG048990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-2097149156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                       ++y+GVr+++ +g+++AeIrdps    r  +r +lg+fgtaeeAa a+++a+ +l+g+
  TRIDC3BG048990.1  97 PHYRGVRRRP-WGKYAAEIRDPS----RpgTRLWLGTFGTAEEAAVAYDRAAFRLRGA 149
                       68********.**********96....355**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
LATPGARAPL ARVGAAMGMD TSLSLGGAAA YLPLNENDSL DMLLFDVLRE ASAVAAASPS  60
SSSSSPPTKM AAAIAASGPA TVEGGRACAA GRAAERPHYR GVRRRPWGKY AAEIRDPSRP  120
GTRLWLGTFG TAEEAAVAYD RAAFRLRGAK ALLNFPPAVG AHEARRGADG AR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-25ERF family protein