PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG049090.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 206aa    MW: 23300.5 Da    PI: 9.0072
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG049090.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B381.48.9e-2663164199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       + +   s++l+ +d++g +W++++iyr++++r++lt+GW++Fv+ ++L +gD v+F   +
  TRIDC3BG049090.8  63 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyqQ-IR-PSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFL--R 151
                       99****************************9843.43.4569************************************************..3 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+++v+r+
  TRIDC3BG049090.8 152 GDDGELRLGVRRA 164
                       489999****996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
HVACRVVDVE LCADPATDEV YARLAMVAEG EIFEKNMGGG RFEGEDDMED GDRERKSRML  60
HMFCKTLTAS DTSTHGGFSV PRRAAEDCFP PLDYQQIRPS QELVAKDLHG AKWRFRHIYR  120
GQPRRHLLTT GWSSFVNKKK LVSGDAVLFL RGDDGELRLG VRRAIQLKNE ALLKAFNSNS  180
SKIHTLSAVA NSLKHRSVFH ICYNPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.18e-87ARF family protein