PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG049970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CPP
Protein Properties Length: 372aa    MW: 40715 Da    PI: 8.329
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG049970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR51.81.6e-16442139
               TCR  1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
                      k++kgC+Ckks ClkkYCeCf+a+  Cse+CkC dCkN 
  TRIDC3BG049970.2  4 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 42
                      589***********************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
LIGKHNKGCH CKKSGCLKKY CECFQANILC SENCKCMDCK NFDGSEDRKH LNFDHKNVIH  60
MQQAANAAVN GAIGATALSS PSTSRKRKHI DSSLDLSTKE HLAIRNGQLS QKNAMASDGS  120
FPIGQSAHPH MMGPFKVTYR PLLADIIQPG DVKELCKLLV TVSGQAAKAY TGRKIQEEKV  180
AEKEDGVGGS LALTNHDREG KSKDQNHRKI SIDDHSSGGT DMGKASLDDS RPDCTDDQKS  240
SRPMSPGTLA LMCDEQDAMF ATSQNAVAPS AIDVDQNRSE LYAEQERCVL TEFRDCLRKL  300
VQYGRMKEEK YSMAIRSEVT GHPGQVNGAL RIPYPKVDVP VVKTFPQSSS KHLVAGNTSS  360
GHLDKRLKPE NT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-68CPP family protein