PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG050220.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 280aa MW: 30301.7 Da PI: 7.5865

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG050220.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	94.9	1.5e-29	53	121	3	71
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssas 71 g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a ++i++l+ ++ ++++ TRIDC3BG050220.2 53 GGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQLPPHQ 121 78*************************************************************777772 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MMSGNNQHQQ SAAAAAEEEE QELARKHAAA VATSRQWSSQ TESRIVRVSR VFGGKDRHSK 60 VKTVKGLRDR RVRLSVQTAI QLYDLQDRLG LNQPSKVVDW LLNAARHEID KLPPLQLPPH 120 QVDLMDHMMT SSSMPLMPHV DDKFCHFAST LAGDGGVKAG ADADGGGAHH NIGRFGYHRF 180 MGLNNNSLGL VNSGMPYNFT GESWNNSSVH QSSGAGSPQV SIAAAAAAHH SAFPSLLSLA 240 PRSHQLVYYS SEADQFPVDD LGSQSLSLSS ARAFHDQTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	1e-39	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG050220.2