PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG051330.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 195aa    MW: 20869.7 Da    PI: 8.0612
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG051330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260110.81e-3443143197
            DUF260   1 aCaaCkvlrrkCakdCvlapyf....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                       +C aCk+lrr+C+++Cv+ap+f     ++ +++fa+vh++FGasnv kll+++p   r+d++++++yeA+ar+ dPvyG+vg+il+lq+q+  
  TRIDC3BG051330.1  43 PCGACKFLRRRCVPGCVFAPHFsgsgRERGAAQFAAVHRVFGASNVAKLLSRVPVALRRDTARTVCYEAQARIADPVYGCVGTILALQHQVIL 135
                       7*********************766333448***********************************************************988 PP

            DUF260  90 lkaelall 97 
                        +  lal+
  TRIDC3BG051330.1 136 FNCRLALA 143
                       77777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MQEEPAPPRK RGGAVHGSAA REQQQQQQQQ ADEASSAAGP GAPCGACKFL RRRCVPGCVF  60
APHFSGSGRE RGAAQFAAVH RVFGASNVAK LLSRVPVALR RDTARTVCYE AQARIADPVY  120
GCVGTILALQ HQVILFNCRL ALASTHPDSA EQLALLQPAY SAASAPSQMV NYDDLPQAVD  180
FMDVEPQMRG LESLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.12e-38LBD family protein